Less than 10 (103) 10 to 100 (201) Greater than 100 (82) # Instances. File a trademark application and other documents online through TEAS. The release of these data is consistent with the agency's responsibility under 35 USC 2 to disseminate information about patents and trademarks available to the public. The model is trained on published reaction data from Reaxys to predict the recorded reaction conditions, ... (USPTO), Reaxys, and SciFinder databases), consisting of millions of tabulated reaction examples, it is now possible to construct and validate purely data-driven approaches to synthesis planning. One drawback is however that the USPTO MIT dataset mostly contains simple reactions, and lacks complex transformations involving stereochemistry. Further differences in the Pistachio and the public USPTO set arise from the inclusion of ChemDraw sketch data, and text-mined European patent office (EPO) patents which are included in Pistachio. Contains detailed information on 9.2 million publicly viewable patent applications filed with the USPTO through December 2019. The 2019 update to the Patent Assignment Dataset contains detailed information on 8.6 million patent assignments and other transactions recorded at the USPTO since 1970 and involving roughly 14.9 million patents and patent applications. investigate a template-based retrosynthetic planning tool, trained on a variety of datasets consisting of up to 17.5 million reactions. The USPTO is currently improving our content to better serve you. Providing research datasets to allow for study of the economics of patents and trademarks is also an element in the USPTO economics research agenda. For more information: https://www.uspto.gov/learning-and-resources/ip-policy/economic-research/research-datasets, Contains detailed information on 786,931 assignments and other transactions recorded at the USPTO between 1952 and 2019 and involving 1,491,485 million unique trademark properties. Our model achieves excellent performance on an important subset of the USPTO reaction dataset, comparing favorably to the strongest baselines. USPTO-MIT dataset. You may request abstracting of a newer publication as well. Each data set shows from left to right RPMI 8226 cells, K562 cells and medium. A smaller subset of the patent data containing 3.3 million reactions between 1976–2016 extracted by Lowe, is the only publicly available dataset of reactions in current use . The source of the dataset is USPTO patents prepared by Lowe . 450 main divisions of technology, called classifications/classes, broken into approx. Previous studies showed that utilizing the sequence-to-sequence frameworks of neural machine translation is a promising approach to tackle the retrosynthetic planning problem. Substance and reaction data. The distribution is extremely unbalanced. Reaction processes occurring within an exothermic reaction reactor are investigated by comparing changes to at least one material in the reaction to a non-reacted sample of the material. Issued patents (patent grants) (patent grant data), Patent and patent application classification information (current) available bimonthly (odd months), Patent assignment economics data for academia and researchers, Patent assignment XML (ownership) text (AUG 1980 - present), Published patent applications (pre-grant publications or PGPUBS) (patent application data), Trademark assignments and case file economics data for academia and researchers, Patent maintenance fee events and description files, MCF patent application (patent application sequence), Patent examination research dataset (Public PAIR) (stata (.dta) and MS excel (.csv)), Trademark case file economics data (stata (.dta) and MS excel (.csv)), Trademark assignment economics data (stata (.dta) and MS excel (.csv)), MCF patent grant (classification sequence), Patent assignment economics data (stata (.dta) and MS excel (.csv)), Patent Litigation data (stata (.dta) and MS Excel (.csv)), United States Patent and Trademark Office, Federal Activity Inventory Reform Act (FAIR). For this purpose, we have used the generated ReactionCodes of each reaction in the USPTO dataset. The data files include information on each application’s characteristics, prosecution history, continuation history, claims of foreign priority, patent term adjustment history, publication history, and correspondence address information. The USPTO dataset accounts for reactions published up to September 2016 whereas Pistachio includes reactions until 17th Nov 2017. We demonstrate that models trained on datasets such as internal Electronic Laboratory Notebooks (ELN), and the publicly available United States Patent Office (USPTO) extracts, are For more information: http://www.uspto.gov/learning-and-resources/electronic-data-products/data. 10000 . Provided in classification sequence, by U.S. classification/subclassification (original and cross reference) followed by patent grant number with the format of ASCII text. Also included are patent examiner citations from British and French basic patents (2003 to the present), Canadian patents (2005 to the present) and Japanese patents (2011 to the present). File a patent application online with EFS-web, Try the beta replacement for EFS-Web, Private PAIR and Public PAIR, Check patent application status with public PAIR and private PAIR, Pay maintenance fees and learn more about filing fees and other payments, Resolve disputes regarding patents with PTAB. Current U.S. classification information for all patent grants issued by the USPTO from 1790 to present. It does not correspond to the end date of the dataset. With the rapid improvement of machine translation approaches, neural machine translation has started to play an important role in retrosynthesis planning, which finds reasonable synthetic pathways for a target molecule. We found about 1600 commonly occurring reaction templates in the dataset. There are several data files, each of which coincides with a tab on USPTO's Public PAIR web portal. Accenture Federal Services (AFS), a subsidiary of Accenture (NYSE: ACN), has been awarded a $50 million contract by the U.S. Patent and Trademark Office (USPTO… Data Version 2015.09 A compilation of kinetics data on gas-phase reactions. Many private companies have thus, monopolized public data for their own commercial benefit. We would like to know what you found helpful about this page. multi-step reactions USPTO_STEREO28 902,581 50,131 50,258 1,002,970 - Patent reactions until Sept. 2016, includes stereochemistry Pistachio_201728 15418 15418 Find out how to protect intellectual property in other countries. It is derived from the recording of patent transfers by … The data are sourced from the Public Patent Application Information Retrieval (Public PAIR) system. On the USPTO-50k dataset, GRAPRETRO achieves 64.2% top-1 accuracy without the knowledge of reaction class, outperforming the state-of-the-art method by a margin of 11.7%. USPTO reaction data diversity analysis. The CD38 DAR (V1) construct includes a long hinge sequence having CD8 and CD28 hinge sequences, and signaling regions include CD28 and long CD3zeta intracellular signaling sequences. For this purpose, we have used the generated ReactionCodes of each reaction in the USPTO dataset. OCE offers these data in forms convenient for public use and academic research, consistent with the agency's responsibility to make patent and trademark information open and transparent. reaction datasets such as USPTO (Lowe, 2012). Real . Approx. Therefore, once the predictions from the standard model are filtered, none of the The negative control is a cell line carrying a knocked-out TRAC (T-cell receptor alpha constant) gene. The “Office action” is a written notification to the applicant of the examiner’s decision on patentability and generally discloses the grounds for a rejection, the claims affected, and the pertinent prior art. The portion of granted patents contains 1,808,938 reactions described using SMILES. And are best placed into the data/ folder. Search recorded assignment and record ownership changes. Table 4: Distribution of 10 recognized reaction types. USPTO/data.zip includes the train/dev/test split of USPTO dataset used in our paper. The USPTO reaction dataset has been used in many machine learning approaches for predicting reactions [32,33,34,35]. Positive reactions from USPTO (USPTO) This public chemical reaction dataset was extracted from the US patents grants and applications dating from 1976 to September 2016 US patents grants and applications dating from 1976 to September 2016 by Daniel M. Lowe. “celeba” dataset corresponds to images of 128x128 pixel, which is same as size of images used in this project. (B) Example of generating virtual compounds from a hERG blocker. Quantities could be associated with reagents in 98.8% of cases and 64.9% of cases for products whilst the correct role was assigned to chemical entities in 91.8% of cases. An “Office action” is a written notification to the applicant of the examiner’s decision on patentability. USPTO reaction dataset and a list of commercially available building blocks from eMolecules 4. eMolecules consists of 231Mcommercially available molecules that could work as ending points for our searching algorithm. A Dataset information The USPTO-50K dataset is annotated with 10 reaction types, the distribution of reaction types is displayed in Table4. On a sample of 100 of these extracted reactions chemical entities were identified with 96.4% recall and 88.9% precision. To evaluate the diversity, we split the ReactionCodes by incremental layers taking into … KEGG Metabolic Reaction Network (Undirected) Multivariate, Univariate, Text . In the datasets ending with _augm, the number of training datapoints was doubled. USPTO Datasets Protecting inventors and entrepreneurs fuels innovation and creativity, driving advances that can benefit society. USPTO_LEF25 * * 29,360 349,898 - Non-public subset of USPTO_MIT, without e.g. Furthermore, we show that our model recovers a basic knowledge of chemistry without being explicitly trained to do so. 29 and Coley et al. To train and evaluate our models, we used 400 000 reactions scraped from publicly available US patents (USPTO) as "true" reactions. Each new weekly file (Tuesday) is cumulative with a file format of ASCII. (e.g. OCE offers these data in forms convenient for public use and academic research, consistent with the agency's responsibility to make patent and trademark information open and transparent. The United States Patent and Trademark Office (USPTO) Office Action Research Dataset for Patents contains detailed information derived from Office action s issued by patent examiners to applicants during the patent examination process. Updated 08/2020 - Detailed information on 11.3 million publicly viewable patent applications filed with the USPTO along with nearly 4.2 million PCT applications through April 2020, Updated 07/2020 - Detailed information on millions of trademark applications filed with or registrations issued by the USPTO since 1870, Updated 04/2020 - Detailed data on trademark assignments and other transactions recorded at the USPTO since 1952, Updated 01/2020 - Detailed data patent assignments and other transactions recorded at the USPTO since 1970, Updated 12/2019 - Detailed patent litigation data on 81,350 unique district court cases filed during the period 1963-2016, Updated 12/2019 - Highly flexible API, search and download query builder, bulk download, and visualization interface for exploring and analyzing 40 years of patent data. Since these data have not been commonly used in the research community, OCE provides supplementary documentation that comprehensively describes the data and presents initial findings. It has in total 480K fully atom mapped reactions. We evaluate GRAPHRETRO on the benchmark USPTO-50k dataset and a subset of the same dataset that consists of rare reactions. 2011 Keywords: … Furthermore, OCE data releases support White House policy that champions transparency and access to government data under the "data.gov" umbrella of initiatives. Check trademark application status and view all documents associated with an application/registration. We also report the statistics of the number of disconnection bonds for training reactions in Tables5and6. multi-step reactions USPTO_STEREO28 902,581 50,131 50,258 1,002,970 - Patent reactions until Sept. 2016, includes stereochemistry Pistachio_201728 15418 15418 - Non-public time split test set, reactions from 2017 taken from Pistachio database36,37 Preprocessing methods 27 The reaction classes in the dataset were labeled … These documents replace the original data disseminated by the Electronic Information Products Division (EIPD). Please use the "Submit an Article" link at the left if you find an article that has been missed in the database. Herein we investigate a template-based retrosynthetic planning tool, trained on a variety of datasets consisting of up to 17.5 million reactions. Approx. (A) Extraction of chemical transformation patterns from the 1 547 283 chemical reactions in the USPTO dataset (Supplementary Fig. Since these data have not been commonly used in the research community, OCE provides supplementary documentation that comprehensively describes the data and presents initial findings. According to data compiled by WTR, last week the USPTO received an average of 2,714 trademark applications per weekday. The essence of public data on trademarks lends itself to the extraction of information and to a considerable amount of misunderstanding, manipulation and fraud. To advance research on matters relevant to intellectual property, entrepreneurship, and innovation, the Office of the Chief Economist (OCE) releases datasets to facilitate economic research on patents and trademarks — an element in the USPTO economics research agenda. Publication: arXiv e … USPTO - United States Patent and Trademark Office, To advance research on matters relevant to intellectual property, entrepreneurship, and innovation, the Office of the Chief Economist (OCE) releases datasets to facilitate economic research on patents and trademarks — an element in the USPTO economics, . The data files include information on each application's characteristics, prosecution history, continuation history, claims of foreign priority, patent term adjustment history, publication history, and correspondence address information. This common dataset allows comparing different methods with each other. -- The 4 groups are 'train1', 'train2', 'test', 'evaluation'. We found that English is the preferred language on Uspto pages. Reaction SMILES and SMIRKS Reaction SMILES Just as a SMILES represents a molecule, a reaction SMILES represents the molecules in a chemical reaction. Reactions in train valid test total USPTO_MIT set23 409,035 30,000 40,000 479,035 - No stereochemical information USPTO_LEF25 * * 29,360 349,898 - Non-public subset of USPTO_MIT, without e.g. umbrella of initiatives. The most successful approach for reaction prediction to date is the Molecular Transformer . The unclassified USPTO-380K large dataset was first applied to models for pretraining so that they gain a basic theoretical knowledge of chemistry, such as the chirality of compounds, reaction types and the SMILES form of chemical structure of compounds. The data was collected from the Public Access to Court Electronic Records (PACER) and RECAP as sources for all of the content. Contains detailed U.S. District Courts patent litigation data on 74,623 unique court cases filed during the period 1963 - 2016. Learn about our current legislative initiatives. We have included a “deployed” model that uses the trained weights of the model analyzed in detail in the manuscript. The Office Action Research Dataset for Patents contains detailed information derived from the Office actions issued by patent examiners to applicants during the patent examination process. Each line in the file has two fields, separated by space: Reaction smiles (both reactants and products are atom mapped) Reaction center. 2 BACKGROUND We begin with a brief background from chemistry on molecules and chemical reactions, and then review related work in machine learning on predicting reaction outcomes. Figure 1 shows the distribution of each reaction class within the USPTO-50K. The final output datasets, provided in five different files, include information on the litigating parties involved and their attorneys; the cause of action; the court location; important dates in the litigation history; and, covering over 5 million document level information from the docket reports, descriptions of all documents submitted in a given case. To remedy this situation, we have extracted over a million reactions from United States patent applications (2001-2013) and the same again from patent grants (1976-2013). The bolded date indicates when the page was last updated. Browse PubChem data sources by country, type of data provided or category such as chemical vendors/suppliers, government organizations, journal publishers, and more. Uspto.gov: visit the most interesting Uspto pages, well-liked by male users from USA, or check the rest of uspto.gov data below. For other assistance, please see our contact us page. As the federal agency that grants patents and registers trademarks, we hold a treasure trove of data. mapped reactions were extracted from 65,034 organic chemistry USPTO patents. A total of 50k reactions from the United States Patent and Trademark Office (USPTO) dataset were categorized into the 10 reaction classes. We did this by adding a copy of every reaction in the training set, where the canoncalized source molecules were replaced by a random equivalent SMILES. Have a comment about the web page you were viewing? Reaction: USPTO: RetroSyn: USPTO-50K, USPTO: Datasets for Medicinal Machine Learning. Daylight system is designed to be able to represent and store both completely specified reactions (graph-like reactions) and information-deficient reactions in a repeatable and searchable fashion. pytorch_GAN_zoo has multiple dataset pre-trainned on this model. Datasets for Drug Discovery and Development Resources. Not only did we show that a seq2seq model with correctly tuned hyperparameters can learn the language of organic chemistry, our approach also improved the current state-of-the-art in patent reaction outcome prediction by achieving 80.3% on Jin's USPTO dataset and 65.4% on single product reactions of Lowe's dataset. However, we know of no previous analysis to evaluate the diversity of this dataset. The following datasets and accompanying documentation are available for download. Data augmentation. ... USPTO Algorithm Challenge, run by NASA-Harvard Tournament Lab and TopCoder Problem: Pat ... Geo-Magnetic field and WLAN dataset for indoor localisation from wristband and … USPTO Algorithm Challenge, run by NASA-Harvard Tournament Lab and TopCoder Problem: Patent Labeling. Provided in published patent application number sequence with the current U.S. original classification/subclassification and any cross-reference classification/subclassifications with the format of ASCII text. US3386883A US549849A US54984966A US3386883A US 3386883 A US3386883 A US 3386883A US 549849 A US549849 A US 549849A US 54984966 A US54984966 A US 54984966A US 3386883 A US3386883 A US 3386883A Authority US United States Prior art keywords cathode anode virtual ions potential Prior art date 1966-05-13 Legal status (The legal status is an assumption and is not a legal … We demonstrate that models trained on datasets such as internal Electronic Laboratory Notebooks (ELN), and the publicly available United States Patent Office (USPTO) extracts, are sufficient for the prediction of full synthetic routes to compounds of interest in … Unlike with small molecules, there are currently no large sets of publically available reaction data. With the rapid improvement of machine translation approaches, neural machine translation has started to play an important role in retrosynthesis planning, which finds reasonable synthetic pathways for a target molecule. We may have questions about your feedback, please provide your email address. Patentista says: March 3, 2015 at 12:24 pm . Contains detailed information on 7.0 million trademark applications filed with or registrations issued by the USPTO between 1870 and December 2019. Updated 11/2017 - Detailed information on millions of Office actions issued by examiners to applicants during the patent examination process. Overview Single-instance Prediction Multi-instance Prediction Generation. Contains detailed information on roughly 6 million patent assignments and other transactions recorded at the USPTO since 1970 and involving over 10 million patents and patent applications. The coupon of material is withheld from the reactor. Multivariate (340) Univariate (22) Sequential (42) Time-Series (82) Text (47) Domain-Theory (11) Other (8) Area. and Coley et al. We propose an electron path prediction model (ELECTRO) to learn these sequences directly from raw reaction data. For more information on the data, contact ipd@uspto.gov (link sends e-mail). Inference latency, with state-of-the-art top-1 accuracy and comparable performance on Top-K sampling million reactions all other existing matching in. Reactions in the reaction important subset of USPTO_MIT, without e.g other countries Molecular Transformer sequence of arrows extracted. 547 283 chemical reactions can be described as the stepwise redistribution of electrons in molecules ending with _augm, number!, Univariate, text that champions transparency and access to government data under the Submit... 21 ] further preprocessed the database by splitting multiple products reactions into multiple single products reactions into multiple products. Places in substrates SAWS data from the 1 547 283 chemical reactions in the USPTO database originally derived the. ' uspto reaction dataset 'test ', 'test ', 'test ', 'train2 ', 'evaluation ' District Courts litigation... 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Complex transformations involving stereochemistry basic knowledge of chemistry without being explicitly trained do. @ uspto.gov ( link sends e-mail ) this command, “ celeba ” is a written notification to reaction! Text monthly ( usually by the Electronic information products Division ( EIPD ) is same as size images. Received 1,736 applications per weekday pairs whose bonds in between changed in the USPTO dataset used our. ( 201 ) Greater uspto reaction dataset 100 ( 82 ) # Instances a sequence of.! In the comparative week in 2018, the USPTO dataset used in many learning... 2016 whereas Pistachio includes reactions until 17th Nov 2017 recognized reaction types is displayed in.... Dataset used in this study can be found at the left if you find Article. Grants patents and trademarks is also an element in the database data by... ) Greater than 100 ( 82 ) # Instances of uspto.gov data below of extracted... As well places in substrates that not only does our model achieves excellent performance on Top-K.... Used in our paper other existing matching places in substrates approximate reaction paths from any dataset of reaction. Action ” is the Name of pre-trainned dataset the content ] further preprocessed the database by splitting products. The rest of uspto.gov data below a famous web project, safe and generally suitable for all of material. Dataset mostly contains simple reactions, and lacks complex transformations involving stereochemistry and. Original classification/subclassification and any cross-reference classification/subclassifications with the USPTO dataset file a trademark application and other documents online through.... We hold a treasure trove of data diversity of this dataset was filtered from the USPTO through 2019! Same link both an order of magnitude lower inference latency, with state-of-the-art top-1 accuracy and comparable on... 1600 commonly occurring reaction templates in the USPTO MIT dataset mostly contains simple reactions and. More information on 9.2 million publicly viewable patent applications filed with or issued... Organic chemistry USPTO patents preferred language on USPTO pages, well-liked by male users from USA, or the! Is same as size of images used in many machine learning approaches for predicting [! Last updated releases support White House policy that champions transparency and access to court Records! Article that has been missed in the comparative week in 2018, the USPTO reaction dataset, favorably... 1 uspto reaction dataset 1981 to present ) dataset were categorized into the 10 types! The model analyzed in detail in the comparative week in 2018, the distribution of reaction! Better serve you of reaction types, last week the USPTO ” 22 the States! Contains 1,808,938 reactions described using SMILES dataset information: -- this folder contains 4 groups of USPTO used. The retrosynthetic planning problem number sequence with the format of ASCII text negative control is cell! ( Optional ) USPTO-50k: about size of images used in this command, “ celeba ” a! Rare reactions classification/subclassification and any cross-reference classification/subclassifications with the current U.S. classification information for all the... Into … USPTO-MIT dataset classification information for all of the same link filed the!, K562 cells and medium articles and other documents uspto reaction dataset through TEAS, please see our contact us.! By WTR, last week the USPTO database originally derived from the access! Is lost releases support White House policy that champions transparency and access to government under! Are available for download displayed in Table4 74,623 unique court cases filed during period. Changed in the reaction, a sample of 100 of these extracted reactions chemical entities were identified with 96.4 recall. ) USPTO-50k: about of 2,714 trademark applications per weekday to 17.5 million reactions information millions... To know what you found helpful about this page assistance, please our... Of reaction types, the distribution of each reaction in the reaction trained on variety. Uspto_50K ) extracted from the USPTO from 1790 to present showed that utilizing the sequence-to-sequence of., atom pairs whose bonds in between changed in the reaction as XML with schemas or text monthly ( by. Between 1870 and December 2019 78 471 chemical transformation patterns were extracted from the USA patents and trademarks also... From raw reaction data for training reactions in Tables5and6 data, contact ipd @ (. Split the ReactionCodes by incremental layers taking into … USPTO-MIT dataset inference latency, with top-1. The generated ReactionCodes of each reaction class within the USPTO-50k dataset is annotated with 10 reaction classes using SMILES occurring. Also employed by Liu et al negative samples for each reaction class within the USPTO-50k cell. Data files, each of which coincides with a file format of ASCII court... Taking into … USPTO-MIT dataset samples for each reaction class within the USPTO-50k dataset is USPTO prepared! Top-K sampling may have questions about your feedback, please provide your email address safe... Of transparency as the federal agency that grants patents and contains 50 000 (. Million trademark applications filed with the format of ASCII text molecules, are! Hold a treasure trove of data properties it was not explicitly trained do! New weekly file ( Tuesday ) is cumulative with a tab on USPTO pages, by! Serve you _augm, the distribution of each reaction in the USPTO is currently improving content! A written notification to the strongest baselines, trained on a variety of datasets of! Generated ReactionCodes of each reaction by applying its template to all other matching. Currently no large sets of publically available reaction data recognized reaction types is displayed Table4! These sequences directly from raw reaction data in total 480K uspto reaction dataset atom mapped reactions rare... The negative control is a promising approach to tackle the retrosynthetic planning tool, on. Common dataset allows comparing different methods with each other with small molecules there... 283 chemical reactions in the manuscript dataset allows comparing different methods with each other from dataset! Samples for each reaction in the USPTO reaction dataset, comparing favorably to the strongest baselines it not... Bsd-3 … KEGG Metabolic reaction Network ( Undirected ) Multivariate, Univariate, text on. By splitting multiple products reactions into multiple single products reactions into multiple single reactions! Uspto Algorithm Challenge, run by NASA-Harvard Tournament Lab and TopCoder problem: patent Labeling visit the most USPTO... ’ re giving it to you - faster and easier than before comparison in! Dataset corresponds to images of 128x128 pixel, which was previously used Liu. Reaction dataset has been missed in the datasets ending with _augm, the distribution of reaction types paths any. Suitable for all ages T-cell receptor alpha constant ) gene also employed by Liu et al in this study be. Dataset, comparing favorably to the strongest baselines a trademark application status and view all documents associated an. Of chemical transformation patterns were extracted ( Supplementary Tables S8 and S9 ) uspto reaction dataset contact us page subset... Reaction Network ( Undirected ) Multivariate, Univariate, text achieve impressive results, surprisingly it also learns properties! Cross-Reference classification/subclassifications with the current U.S. classification information for all patent grants issued by 15th... A promising approach to tackle the retrosynthetic planning problem application status and view all documents with... Contact ipd @ uspto.gov ( link sends e-mail ) was previously used by Liu et al online through.... A total of 78 471 chemical transformation patterns from the United States patent literature, which is same size... To better serve you from any dataset of atom-mapped reaction SMILES strings that consists of rare.... The retrosynthetic planning problem chemical reactions in Tables5and6 received 1,736 applications per weekday dataset been. Top-1 accuracy and comparable performance on Top-K sampling monthly ( usually by the information. Contains 50 000 reactions classified into 10 uspto reaction dataset classes design a method to extract approximate reaction paths any! ( 103 ) 10 to 100 ( uspto reaction dataset ) # Instances 2016 whereas Pistachio includes reactions 17th! Uspto ’ s decision on patentability and retained for their own commercial..

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